V. Campodonico, J. Ruelle, A. Fitzgerald, Y. Bergman, B. Osborne, D. Bourdas, J. Lu, K. Carroll, P. Simner. Journal of Clinical Microbiology, Volume 63, Issue 5, DOI: 10.1128/jcm.01670-24, May 2025.
Simply Managing Complex Data
Microbiology
DL Church, L. Cerutti, A. Gurtler, T. Griener, A. Zelazny, and S. Emler. Clinical Microbiology Reviews, 09Sep2020 9;33(4):e00053-19. doi: 10.1128/CMR.00053-19.
RJH Miller, B. Chow, D. Pillai, and D. Church. BMC Infectious Diseases. 16:146. Published online April 12, 2016, 10 pages..
T. Lynch, D. Gregson, and DL Church. Journal of Clinical Microbiology. March 2016, Volume 54, Number 3, pages 712-717.
S. Chatellier, N. Mugnier, F. Allard, B. Bonnaud, V. Collin, A. van Belkum, J. Veyrieras, and S. Emler. Journal of Medical Microbiology. Issue 63, accepted July 24, 2014, pages 1311-1315.
Read more: Comparison of two approaches for the classification of 16S rRNA gene sequences
- Automated Annotation of Bacterial 16S rRNA Gene Sequences to the Species Level using the SmartGene Centroid Approach
- Identification by 16S rRNA Gene Sequencing of an Actinomyces Hongkongensis Isolate Recovered from a Patient with Pelvic Actinomycosis
- Accurate identification of fastidious Gram-negative rods: integration of both conventional phenotypic methods and 16S rRNA gene analysis
- Broad-Range 16S rRNA Gene Polymerase Chain Reaction for Diagnosis of Culture-Negative Bacterial Infections
- Bacteria 2025 Evaluation of long-read 16S rRNA next-generation sequencing for identification of bacterial isolates in a clinical diagnostic laboratory
- Microbiology 2023 Reliability of species detection in 16S microbiome analysis: Comparison of five widely used pipelines and recommendations for a more standardized approach
- Bacteria 2020 Performance and Application of 16S rRNA Gene Cycle Sequencing for Routine Identification of Bacteria in the Clinical Microbiology Laboratory
- Fungi 2024 Using a Centroid-based approach for a reliable identification of morels (Morchella spp.): A case study for food authentication
- Fungi 2023 Using a Centroid-based approach to help ID morels
- Fungi 2018 Molecular detection of fungal pathogens in clinical specimens by 18S rDNA high-throughput screening in comparison to ITS PCR and culture.